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c1galt1lb core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like b [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130524071, updated on 27-Mar-2024

Summary

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Gene symbol
c1galt1lb
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like b
See related
EnsemblRapid:ENSTFLG00005005918
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
zebrafish all
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Genomic context

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See c1galt1lb in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 4 NC_079523.1 (11093053..11097025)

Chromosome 4 - NC_079523.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-N-acetyl-galactosaminyl transferase 1b Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene apolipoprotein F Neighboring gene signal transducer and activator of transcription 2 Neighboring gene G protein-coupled receptor 84

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079523.1 Chromosome 4 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079523.1 Reference ASM371156v2 Primary Assembly

    Range
    11093053..11097025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057029808.1 → XP_056885788.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B

  2. XM_057029807.1 → XP_056885787.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B

    Related
    ENSTFLP00005010371.1, ENSTFLT00005011124.1
Nucleotide Protein
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