U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC130523415 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130523415, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC130523415
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like
Locus tag
D4764_03G0009140
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC130523415 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 3 NC_079522.1 (11224608..11228388)

Chromosome 3 - NC_079522.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein GLI2-like Neighboring gene zinc finger protein GLI4-like Neighboring gene CLIP-associating protein 1-B-like Neighboring gene U4atac minor spliceosomal RNA Neighboring gene H(+)/Cl(-) exchange transporter 4 Neighboring gene epoxide hydrolase 2, cytoplasmic Neighboring gene phospholipase A and acyltransferase 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_079522.1 Chromosome 3 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like
Names
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079522.1 Reference ASM371156v2 Primary Assembly

    Range
    11224608..11228388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057028718.1 → XP_056884698.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases