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pnpla4 patatin-like phospholipase domain containing 4 [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130522104, updated on 6-Jun-2024

Summary

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Gene symbol
pnpla4
Gene description
patatin-like phospholipase domain containing 4
Locus tag
D4764_03G0012610
See related
EnsemblRapid:ENSTFLG00005012755
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See pnpla4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 3 NC_079522.1 (18035357..18041119)

Chromosome 3 - NC_079522.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130522106 Neighboring gene pseudouridine 5'-phosphatase Neighboring gene uncharacterized LOC130522107 Neighboring gene steroid sulfatase (microsomal), isozyme S Neighboring gene anosmin 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079522.1 Chromosome 3 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triglyceride lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4
Names
Patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079522.1 Reference ASM371156v2 Primary Assembly

    Range
    18035357..18041119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057026130.1 → XP_056882110.1  patatin-like phospholipase domain-containing protein 4

    UniProtKB/TrEMBL
    A0A5C6NAV1
    Related
    ENSTFLP00005025267.1, ENSTFLT00005026280.1

RNA

  1. XR_008949547.1 RNA Sequence

  2. XR_008949549.1 RNA Sequence

  3. XR_008949548.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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