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LOC130512514 starch synthase 2, chloroplastic/amyloplastic-like [ Raphanus sativus (radish) ]

Gene ID: 130512514, updated on 18-Sep-2024

Summary

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Gene symbol
LOC130512514
Gene description
starch synthase 2, chloroplastic/amyloplastic-like
Locus tag
Rs2_19473
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC130512514 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 5 NC_079515.1 (528441..531964, complement)

Chromosome 5 - NC_079515.1Genomic Context describing neighboring genes Neighboring gene pre-rRNA-processing protein ESF1 Neighboring gene uncharacterized protein At5g19025-like Neighboring gene peroxidase 27-like Neighboring gene pyruvate, phosphate dikinase regulatory protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079515.1 Chromosome 5 Reference ASM80110v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome analysis in radish (Raphanus sativus L.) and identification of critical genes involved in bolting and flowering. Nie S, et al. BMC Genomics, 2016 May 23. PMID 27216755, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 2, chloroplastic/amyloplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079515.1 Reference ASM80110v3 Primary Assembly

    Range
    528441..531964 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057010576.1 → XP_056866556.1  starch synthase 2, chloroplastic/amyloplastic-like

    UniProtKB/TrEMBL
    A0A9W3DSD9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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