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LOC130510451 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 [ Raphanus sativus (radish) ]

Gene ID: 130510451, updated on 20-Nov-2023

Summary

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Gene symbol
LOC130510451
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC130510451 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 4 NC_079514.1 (3849384..3853080, complement)

Chromosome 4 - NC_079514.1Genomic Context describing neighboring genes Neighboring gene S-protein homolog 9-like Neighboring gene uncharacterized LOC130511574 Neighboring gene early nodulin-like protein 2 Neighboring gene proton pump-interactor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079514.1 Chromosome 4 Reference ASM80110v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079514.1 Reference ASM80110v3 Primary Assembly

    Range
    3849384..3853080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057006781.1 → XP_056862761.1  LOW QUALITY PROTEIN: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

    UniProtKB/TrEMBL
    A0A9W3DFU1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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