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LOC130506199 probable galacturonosyltransferase-like 2 [ Raphanus sativus (radish) ]

Gene ID: 130506199, updated on 20-Nov-2023

Summary

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Gene symbol
LOC130506199
Gene description
probable galacturonosyltransferase-like 2
Locus tag
Rs2_51260
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC130506199 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) Unplaced Scaffold NW_026618288.1 (8542..9934)

NW_026618288.1Genomic Context describing neighboring genes Neighboring gene BES1/BZR1 homolog protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026618288 Unplaced Scaffold Reference ASM80110v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase-like 2
Names
putative galacturonosyltransferase-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NW_026618288.1 Reference ASM80110v3 Primary Assembly

    Range
    8542..9934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057000833.1 → XP_056856813.1  probable galacturonosyltransferase-like 2

    UniProtKB/TrEMBL
    A0A9W3D034
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases