U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC130504252 O-fucosyltransferase 5-like [ Raphanus sativus (radish) ]

Gene ID: 130504252, updated on 20-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC130504252
Gene description
O-fucosyltransferase 5-like
Locus tag
Rs2_48835
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC130504252 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) Unplaced Scaffold NW_026616765.1 (7202..9572)

NW_026616765.1Genomic Context describing neighboring genes Neighboring gene auxin-responsive protein SAUR77-like Neighboring gene alanine aminotransferase 1, mitochondrial Neighboring gene ATPase 10, plasma membrane-type Neighboring gene CASP-like protein 2A1 Neighboring gene glutathione S-transferase U26-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_026616765 Unplaced Scaffold Reference ASM80110v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Construction of a high-resolution linkage map of Rfd1, a restorer-of-fertility locus for cytoplasmic male sterility conferred by DCGMS cytoplasm in radish (Raphanus sativus L.) using synteny between radish and Arabidopsis genomes. Cho Y, et al. Theor Appl Genet, 2012 Aug. PMID 22434503

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
O-fucosyltransferase 5-like
Names
O-fucosyltransferase family protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NW_026616765.1 Reference ASM80110v3 Primary Assembly

    Range
    7202..9572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056998852.1 → XP_056854832.1  O-fucosyltransferase 5-like

    UniProtKB/TrEMBL
    A0A9W3CTG8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.