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LOC130498306 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Raphanus sativus (radish) ]

Gene ID: 130498306, updated on 20-Nov-2023

Summary

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Gene symbol
LOC130498306
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Locus tag
Rs2_36662
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC130498306 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 8 NC_079518.1 (4042840..4045564, complement)

Chromosome 8 - NC_079518.1Genomic Context describing neighboring genes Neighboring gene bidirectional sugar transporter SWEET1 Neighboring gene probable beta-1,4-xylosyltransferase IRX10 Neighboring gene uncharacterized protein At1g21580 Neighboring gene protein kinase STUNTED

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079518.1 Chromosome 8 Reference ASM80110v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079518.1 Reference ASM80110v3 Primary Assembly

    Range
    4042840..4045564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056991541.1 → XP_056847521.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A9W3C7G8

  2. XM_056991540.1 → XP_056847520.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A9W3C7L8
Nucleotide Protein
Heading Accession and Version

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