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pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Triplophysa dalaica ]

Gene ID: 130425301, updated on 27-Mar-2024

Summary

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Gene symbol
pomgnt1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
See related
EnsemblRapid:ENSTDLG00000007825
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa dalaica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See pomgnt1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM1584641v1 (GCF_015846415.1) 6 NC_079547.1 (17252948..17263058, complement)

Chromosome 6 - NC_079547.1Genomic Context describing neighboring genes Neighboring gene phosphoinositide-3-kinase, regulatory subunit 3b (gamma) Neighboring gene tetraspanin-1 Neighboring gene uncharacterized LOC130424901 Neighboring gene adenylate cyclase activating polypeptide 1b (pituitary) receptor type I

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079547.1 Chromosome 6 Reference ASM1584641v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015846415.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1584641v1 Primary Assembly

Genomic

  1. NC_079547.1 Reference ASM1584641v1 Primary Assembly

    Range
    17252948..17263058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056751546.1 → XP_056607524.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

    Related
    ENSTDLP00000014772.1, ENSTDLT00000015519.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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