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hcfc1a host cell factor C1a [ Triplophysa dalaica ]

Gene ID: 130409930, updated on 27-Mar-2024

Summary

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Gene symbol
hcfc1a
Gene description
host cell factor C1a
See related
EnsemblRapid:ENSTDLG00000016218
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa dalaica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See hcfc1a in Genome Data Viewer
Location:
chromosome: 21
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM1584641v1 (GCF_015846415.1) 21 NC_079562.1 (7840832..7857622)

Chromosome 21 - NC_079562.1Genomic Context describing neighboring genes Neighboring gene red-sensitive opsin Neighboring gene opsin 1 (cone pigments), short-wave-sensitive 2 Neighboring gene uncharacterized LOC130409933 Neighboring gene GATA binding protein 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079562.1 Chromosome 21 Reference ASM1584641v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015846415.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1584641v1 Primary Assembly

Genomic

  1. NC_079562.1 Reference ASM1584641v1 Primary Assembly

    Range
    7840832..7857622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056734151.1 → XP_056590129.1  host cell factor 1a

    Related
    ENSTDLP00000031084.1, ENSTDLT00000032784.1
Nucleotide Protein
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Gene LinkOut

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