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TBXAS1 thromboxane A synthase 1 [ Oenanthe melanoleuca ]

Gene ID: 130264075, updated on 3-Aug-2024

Summary

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Gene symbol
TBXAS1
Gene description
thromboxane A synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oenanthe melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe
Orthologs
human mouse all
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Genomic context

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See TBXAS1 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_05 current OMel1.0 (GCF_029582105.1) 1A NC_079334.1 (17277633..17515163)

Chromosome 1A - NC_079334.1Genomic Context describing neighboring genes Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene uncharacterized LOC130264056 Neighboring gene protein mono-ADP-ribosyltransferase PARP12-like Neighboring gene Spi-C transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079334.1 Chromosome 1A Reference OMel1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane-A synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thromboxane-A synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029582105.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OMel1.0

Genomic

  1. NC_079334.1 Reference OMel1.0

    Range
    17277633..17515163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056512066.1 → XP_056368041.1  thromboxane-A synthase isoform X1

  2. XM_056512094.1 → XP_056368069.1  thromboxane-A synthase isoform X4

  3. XM_056512058.1 → XP_056368033.1  thromboxane-A synthase isoform X1

  4. XM_056512101.1 → XP_056368076.1  thromboxane-A synthase isoform X5

  5. XM_056512075.1 → XP_056368050.1  thromboxane-A synthase isoform X2

  6. XM_056512085.1 → XP_056368060.1  thromboxane-A synthase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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