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EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 [ Oenanthe melanoleuca ]

Gene ID: 130258338, updated on 3-Aug-2024

Summary

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Gene symbol
EDEM1
Gene description
ER degradation enhancing alpha-mannosidase like protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oenanthe melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe
Orthologs
human mouse all
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Genomic context

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See EDEM1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_05 current OMel1.0 (GCF_029582105.1) 12 NC_079346.1 (1035142..1046993, complement)

Chromosome 12 - NC_079346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130258423 Neighboring gene LIM and cysteine rich domains 1 Neighboring gene glutamate metabotropic receptor 7 Neighboring gene ARF like GTPase 8B Neighboring gene basic helix-loop-helix family member e40

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079346.1 Chromosome 12 Reference OMel1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum mannose trimming IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER degradation-enhancing alpha-mannosidase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029582105.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OMel1.0

Genomic

  1. NC_079346.1 Reference OMel1.0

    Range
    1035142..1046993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056501607.1 → XP_056357582.1  ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X1

  2. XM_056501608.1 → XP_056357583.1  ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X2

  3. XM_056501609.1 → XP_056357584.1  ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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