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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Oenanthe melanoleuca ]

Gene ID: 130256803, updated on 3-Aug-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Oenanthe melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_05 current OMel1.0 (GCF_029582105.1) 9 NC_079343.1 (20219796..20237077)

Chromosome 9 - NC_079343.1Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene small nucleolar RNA SNORA63 Neighboring gene replication factor C subunit 4 Neighboring gene eukaryotic translation initiation factor 4A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079343.1 Chromosome 9 Reference OMel1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029582105.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OMel1.0

Genomic

  1. NC_079343.1 Reference OMel1.0

    Range
    20219796..20237077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056498805.1 → XP_056354780.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  2. XM_056498801.1 → XP_056354776.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  3. XM_056498804.1 → XP_056354779.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  4. XM_056498798.1 → XP_056354773.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  5. XM_056498797.1 → XP_056354772.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  6. XM_056498800.1 → XP_056354775.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  7. XM_056498806.1 → XP_056354781.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X2

  8. XM_056498807.1 → XP_056354782.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X3

  9. XM_056498799.1 → XP_056354774.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

  10. XM_056498802.1 → XP_056354777.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase isoform X1

RNA

  1. XR_008841188.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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