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LOC130253160 putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [ Oenanthe melanoleuca ]

Gene ID: 130253160, updated on 3-Aug-2024

Summary

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Gene symbol
LOC130253160
Gene description
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
Gene type
protein coding
RefSeq status
MODEL
Organism
Oenanthe melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe
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Genomic context

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See LOC130253160 in Genome Data Viewer
Location:
chromosome: 4A
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_05 current OMel1.0 (GCF_029582105.1) 4A NC_079338.1 (2653555..2675243, complement)

Chromosome 4A - NC_079338.1Genomic Context describing neighboring genes Neighboring gene angiomotin Neighboring gene transient receptor potential cation channel subfamily C member 5 Neighboring gene UDP-N-acetylglucosamine transferase subunit ALG13 homolog Neighboring gene serine rich and transmembrane domain containing 2 Neighboring gene doublecortin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079338.1 Chromosome 4A Reference OMel1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029582105.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OMel1.0

Genomic

  1. NC_079338.1 Reference OMel1.0

    Range
    2653555..2675243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056491484.1 → XP_056347459.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X2

  2. XM_056491483.1 → XP_056347458.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X1

  3. XM_056491485.1 → XP_056347460.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X3

  4. XM_056491486.1 → XP_056347461.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X4

Nucleotide Protein
Heading Accession and Version

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