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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Oenanthe melanoleuca ]

Gene ID: 130248628, updated on 3-Aug-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Oenanthe melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_05 current OMel1.0 (GCF_029582105.1) 1A NC_079334.1 (4292006..4345588, complement)

Chromosome 1A - NC_079334.1Genomic Context describing neighboring genes Neighboring gene RAD52 homolog, DNA repair protein Neighboring gene WNK lysine deficient protein kinase 1 Neighboring gene ninjurin 2 Neighboring gene coiled-coil domain containing 77 Neighboring gene lysine demethylase 5A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079334.1 Chromosome 1A Reference OMel1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029582105.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OMel1.0

Genomic

  1. NC_079334.1 Reference OMel1.0

    Range
    4292006..4345588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056482510.1 → XP_056338485.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1

  2. XM_056482511.1 → XP_056338486.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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