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kirrel3b kirre like nephrin family adhesion molecule 3b [ Pseudoliparis swirei ]

Gene ID: 130211236, updated on 29-May-2024

Summary

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Gene symbol
kirrel3b
Gene description
kirre like nephrin family adhesion molecule 3b
See related
EnsemblRapid:ENSRIWG00000002014
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudoliparis swirei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Pseudoliparis
Orthologs
zebrafish all
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Genomic context

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See kirrel3b in Genome Data Viewer
Location:
chromosome: 20
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_05 current NWPU_hadal_v1 (GCF_029220125.1) 20 NC_079407.1 (6372846..6545354)

Chromosome 20 - NC_079407.1Genomic Context describing neighboring genes Neighboring gene somatolactin alpha Neighboring gene uncharacterized LOC130211233 Neighboring gene BARX homeobox 2 Neighboring gene RNA binding motif protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079407.1 Chromosome 20 Reference NWPU_hadal_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029220125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NWPU_hadal_v1 Primary Assembly

Genomic

  1. NC_079407.1 Reference NWPU_hadal_v1 Primary Assembly

    Range
    6372846..6545354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056441963.1 → XP_056297938.1  kin of IRRE-like protein 3 isoform X1

  2. XM_056441965.1 → XP_056297940.1  kin of IRRE-like protein 3 isoform X2

  3. XM_056441966.1 → XP_056297941.1  kin of IRRE-like protein 3 isoform X3

  4. XM_056441967.1 → XP_056297942.1  kin of IRRE-like protein 3 isoform X4

    Related
    ENSRIWP00000004433.1, ENSRIWT00000004887.1
Nucleotide Protein
Heading Accession and Version

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