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LOC130209414 C-terminal-binding protein 1 [ Pseudoliparis swirei ]

Gene ID: 130209414, updated on 29-May-2024

Summary

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Gene symbol
LOC130209414
Gene description
C-terminal-binding protein 1
See related
EnsemblRapid:ENSRIWG00000001304
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudoliparis swirei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Pseudoliparis
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Genomic context

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See LOC130209414 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_05 current NWPU_hadal_v1 (GCF_029220125.1) 19 NC_079406.1 (22355287..22380089, complement)

Chromosome 19 - NC_079406.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor receptor-like 1 Neighboring gene probable E3 SUMO-protein ligase RNF212 Neighboring gene spondin 2b, extracellular matrix protein Neighboring gene uncharacterized LOC130209579 Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079406.1 Chromosome 19 Reference NWPU_hadal_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029220125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NWPU_hadal_v1 Primary Assembly

Genomic

  1. NC_079406.1 Reference NWPU_hadal_v1 Primary Assembly

    Range
    22355287..22380089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056439048.1 → XP_056295023.1  C-terminal-binding protein 1 isoform X1

    Related
    ENSRIWP00000002697.1, ENSRIWT00000003146.1

  2. XM_056439050.1 → XP_056295025.1  C-terminal-binding protein 1 isoform X2

    Related
    ENSRIWP00000002393.1, ENSRIWT00000002840.1
Nucleotide Protein
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