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lman2la lectin, mannose-binding 2-like a [ Pseudoliparis swirei ]

Gene ID: 130205696, updated on 19-Jun-2024

Summary

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Gene symbol
lman2la
Gene description
lectin, mannose-binding 2-like a
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudoliparis swirei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Pseudoliparis
Orthologs
zebrafish all
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Genomic context

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See lman2la in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_05 current NWPU_hadal_v1 (GCF_029220125.1) 15 NC_079402.1 (14060229..14067654)

Chromosome 15 - NC_079402.1Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit 13-like Neighboring gene mitochondrial fission process 1 Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene WW domain binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079402.1 Chromosome 15 Reference NWPU_hadal_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lectin, mannose-binding 2-like a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029220125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NWPU_hadal_v1 Primary Assembly

Genomic

  1. NC_079402.1 Reference NWPU_hadal_v1 Primary Assembly

    Range
    14060229..14067654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056433192.1 → XP_056289167.1  lectin, mannose-binding 2-like a

Nucleotide Protein
Heading Accession and Version

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