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mmadhca metabolism of cobalamin associated Da [ Pseudoliparis swirei ]

Gene ID: 130204305, updated on 29-May-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
EnsemblRapid:ENSRIWG00000015675
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudoliparis swirei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Pseudoliparis
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_05 current NWPU_hadal_v1 (GCF_029220125.1) 14 NC_079401.1 (4086356..4089920)

Chromosome 14 - NC_079401.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:dkey-154b15.1 Neighboring gene Rho family GTPase 3a Neighboring gene ly6/PLAUR domain-containing protein 6-like Neighboring gene uncharacterized LOC130204311 Neighboring gene paraspeckle component 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079401.1 Chromosome 14 Reference NWPU_hadal_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029220125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NWPU_hadal_v1 Primary Assembly

Genomic

  1. NC_079401.1 Reference NWPU_hadal_v1 Primary Assembly

    Range
    4086356..4089920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056430934.1 → XP_056286909.1  metabolism of cobalamin associated Da

    Related
    ENSRIWP00000038743.1, ENSRIWT00000040903.1

  2. XM_056430937.1 → XP_056286912.1  metabolism of cobalamin associated Da

  3. XM_056430936.1 → XP_056286911.1  metabolism of cobalamin associated Da

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases