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tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Rhinichthys klamathensis goyatoka ]

Gene ID: 130077856, updated on 27-Mar-2024

Summary

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Gene symbol
tab2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinichthys klamathensis goyatoka (sub-species: goyatoka)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Rhinichthys; Rhinichthys klamathensis
Orthologs
human zebrafish all
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Genomic context

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See tab2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_05 current OSU_Roscu_1.1 (GCF_029890125.1) Unplaced Scaffold NW_026606555.1 (1836966..1896263, complement)

NW_026606555.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene scavenger receptor class A, member 5 (putative) Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026606555 Unplaced Scaffold Reference OSU_Roscu_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029890125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OSU_Roscu_1.1

Genomic

  1. NW_026606555.1 Reference OSU_Roscu_1.1

    Range
    1836966..1896263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056243617.1 → XP_056099592.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

  2. XM_056244308.1 → XP_056100283.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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