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LOC130077635 cytochrome c oxidase subunit 2-like [ Rhinichthys klamathensis goyatoka ]

Gene ID: 130077635, updated on 16-Nov-2023

Summary

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Gene symbol
LOC130077635
Gene description
cytochrome c oxidase subunit 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinichthys klamathensis goyatoka (sub-species: goyatoka)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Rhinichthys; Rhinichthys klamathensis
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Genomic context

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See LOC130077635 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_05 current OSU_Roscu_1.1 (GCF_029890125.1) Unplaced Scaffold NW_026607166.1 (40969..41965)

NW_026607166.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-like Neighboring gene NADH-ubiquinone oxidoreductase chain 2-like Neighboring gene NADH-ubiquinone oxidoreductase chain 4-like Neighboring gene NADH-ubiquinone oxidoreductase chain 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026607166 Unplaced Scaffold Reference OSU_Roscu_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytochrome-c oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP synthesis coupled electron transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cytochrome c oxidase subunit 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029890125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OSU_Roscu_1.1

Genomic

  1. NW_026607166.1 Reference OSU_Roscu_1.1

    Range
    40969..41965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056242934.1 → XP_056098909.1  LOW QUALITY PROTEIN: cytochrome c oxidase subunit 2-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases