U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tjp2a tight junction protein 2a (zona occludens 2) [ Rhinichthys klamathensis goyatoka ]

Gene ID: 130076577, updated on 27-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
tjp2a
Gene description
tight junction protein 2a (zona occludens 2)
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinichthys klamathensis goyatoka (sub-species: goyatoka)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Rhinichthys; Rhinichthys klamathensis
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tjp2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_05 current OSU_Roscu_1.1 (GCF_029890125.1) Unplaced Scaffold NW_026607104.1 (411068..450887)

NW_026607104.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130076587 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta a Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1b Neighboring gene MAM domain containing 2b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_026607104 Unplaced Scaffold Reference OSU_Roscu_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tight junction protein ZO-2a

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029890125.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OSU_Roscu_1.1

Genomic

  1. NW_026607104.1 Reference OSU_Roscu_1.1

    Range
    411068..450887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056241714.1 → XP_056097689.1  tight junction protein ZO-2a isoform X6

  2. XM_056241713.1 → XP_056097688.1  tight junction protein ZO-2a isoform X6

  3. XM_056241708.1 → XP_056097683.1  tight junction protein ZO-2a isoform X1

  4. XM_056241709.1 → XP_056097684.1  tight junction protein ZO-2a isoform X2

  5. XM_056241711.1 → XP_056097686.1  tight junction protein ZO-2a isoform X4

  6. XM_056241712.1 → XP_056097687.1  tight junction protein ZO-2a isoform X5

  7. XM_056241710.1 → XP_056097685.1  tight junction protein ZO-2a isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases