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LOC129953752 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Eupeodes corollae ]

Gene ID: 129953752, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129953752
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
See related
EnsemblRapid:ENSEEAG00000007338
Gene type
protein coding
RefSeq status
MODEL
Organism
Eupeodes corollae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Syrphoidea; Syrphidae; Syrphinae; Syrphini; Eupeodes; Eupeodes
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Genomic context

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See LOC129953752 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_05 current idEupCoro1.1 (GCF_945859685.1) 1 NC_079147.1 (189800563..189816062, complement)

Chromosome 1 - NC_079147.1Genomic Context describing neighboring genes Neighboring gene dual oxidase Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene enoyl-CoA hydratase domain-containing protein 3, mitochondrial-like Neighboring gene cuticle protein 8-like Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079147.1 Chromosome 1 Reference idEupCoro1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_945859685.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idEupCoro1.1

Genomic

  1. NC_079147.1 Reference idEupCoro1.1

    Range
    189800563..189816062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056067185.1 → XP_055923160.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    Related
    ENSEEAP00000009831.1, ENSEEAT00000011448.1

  2. XM_056067186.1 → XP_055923161.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X2

Nucleotide Protein
Heading Accession and Version

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