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LOC129904279 F-box protein GID2 [ Solanum dulcamara ]

Gene ID: 129904279, updated on 16-Nov-2023

Summary

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Gene symbol
LOC129904279
Gene description
F-box protein GID2
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum dulcamara
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC129904279 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_05 current daSolDulc1.2 (GCF_947179165.1) 9 NC_077245.1 (4690347..4691428, complement)

Chromosome 9 - NC_077245.1Genomic Context describing neighboring genes Neighboring gene putative receptor protein kinase ZmPK1 Neighboring gene protein MRG2-like Neighboring gene MFP1 attachment factor 1 Neighboring gene cytochrome P450 81C13-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_077245.1 Chromosome 9 Reference daSolDulc1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947179165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference daSolDulc1.2

Genomic

  1. NC_077245.1 Reference daSolDulc1.2

    Range
    4690347..4691428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055979818.1 → XP_055835793.1  F-box protein GID2

Nucleotide Protein
Heading Accession and Version

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