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SCA2 phosphoglycan beta 1,2 arabinosyltransferase [ Leishmania major strain Friedlin ]

Gene ID: 12981679, updated on 18-Aug-2023

Summary

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Gene symbol
SCA2
Gene description
phosphoglycan beta 1,2 arabinosyltransferase
Locus tag
LMJF_02_0180
Gene type
protein coding
RNA name
phosphoglycan beta 1,2 arabinosyltransferase
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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See SCA2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_007244.2 (90005..92833, complement)

Chromosome 2 - NC_007244.2Genomic Context describing neighboring genes Neighboring gene phosphoglycan beta 1,3 galactosyltransferase Neighboring gene phosphoglycan beta 1,3 galactosyltransferase Neighboring gene phosphoglycan beta 1,3 galactosyltransferase Neighboring gene phosphoglycan beta 1,3 galactosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007244.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
phosphoglycan beta 1,2 arabinosyltransferase
XP_003721624.1
  • previous protein_id=AAZ10027.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007244.2 Reference assembly

    Range
    90005..92833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003721576.1 → XP_003721624.1  phosphoglycan beta 1,2 arabinosyltransferase [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_003721624.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9AC93, Q7YTA5
    Conserved Domains (1) summary
    cl16914
    Location:418 → 460
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
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