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man2b1 mannosidase, alpha, class 2B, member 1 [ Leucoraja erinaceus (little skate) ]

Gene ID: 129714513, updated on 12-Oct-2024

Summary

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Gene symbol
man2b1
Gene description
mannosidase, alpha, class 2B, member 1
See related
EnsemblRapid:ENSLERG00010015231
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See man2b1 in Genome Data Viewer
Location:
chromosome: 39
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 39 NC_073415.1 (7923277..7958677)

Chromosome 39 - NC_073415.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129714518 Neighboring gene afadin- and alpha-actinin-binding protein-like Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene tRNA methyltransferase 1 Neighboring gene nucleus accumbens associated 1, BEN and BTB (POZ) domain containing b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073415.1 Chromosome 39 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal alpha-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073415.1 Reference Leri_hhj_1 Primary Assembly

    Range
    7923277..7958677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055664174.1 → XP_055520149.1  lysosomal alpha-mannosidase

    Related
    ENSLERP00010026235.1, ENSLERT00010039224.1
Nucleotide Protein
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