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LOC129714207 calpain-3-like [ Leucoraja erinacea (little skate) ]

Gene ID: 129714207, updated on 11-Jun-2024

Summary

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Gene symbol
LOC129714207
Gene description
calpain-3-like
See related
EnsemblRapid:ENSLERG00010004925
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
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Genomic context

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See LOC129714207 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 38 NC_073414.1 (6748677..6784335)

Chromosome 38 - NC_073414.1Genomic Context describing neighboring genes Neighboring gene mucin-19-like Neighboring gene uncharacterized LOC129714206 Neighboring gene FBJ murine osteosarcoma viral oncogene homolog B Neighboring gene vascular endothelial growth factor A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073414.1 Chromosome 38 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073414.1 Reference Leri_hhj_1 Primary Assembly

    Range
    6748677..6784335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055663731.1 → XP_055519706.1  calpain-3-like isoform X1

    Related
    ENSLERP00010005894.1, ENSLERT00010010519.1

  2. XM_055663733.1 → XP_055519708.1  calpain-3-like isoform X2

  3. XM_055663734.1 → XP_055519709.1  calpain-3-like isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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