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naga N-acetylgalactosaminidase, alpha [ Leucoraja erinaceus (little skate) ]

Gene ID: 129713764, updated on 12-Oct-2024

Summary

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Gene symbol
naga
Gene description
N-acetylgalactosaminidase, alpha
See related
EnsemblRapid:ENSLERG00010010450
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See naga in Genome Data Viewer
Location:
chromosome: 37
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 37 NC_073413.1 (2498935..2525791, complement)

Chromosome 37 - NC_073413.1Genomic Context describing neighboring genes Neighboring gene protein interacting with prkca 1 Neighboring gene uncharacterized LOC129713765 Neighboring gene single-pass membrane protein with aspartate-rich tail 1b Neighboring gene NADH:ubiquinone oxidoreductase subunit A6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073413.1 Chromosome 37 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073413.1 Reference Leri_hhj_1 Primary Assembly

    Range
    2498935..2525791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055663048.1 → XP_055519023.1  alpha-N-acetylgalactosaminidase

    Related
    ENSLERP00010016976.1, ENSLERT00010025752.1
Nucleotide Protein
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