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eogt EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [ Leucoraja erinaceus (little skate) ]

Gene ID: 129704508, updated on 12-Oct-2024

Summary

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Gene symbol
eogt
Gene description
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
See related
EnsemblRapid:ENSLERG00010025596
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See eogt in Genome Data Viewer
Location:
chromosome: 16
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 16 NC_073392.1 (9024075..9062902, complement)

Chromosome 16 - NC_073392.1Genomic Context describing neighboring genes Neighboring gene chemokine-like protein TAFA-1 Neighboring gene TAFA chemokine like family member 4b Neighboring gene U6 spliceosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene TATA element modulatory factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073392.1 Chromosome 16 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073392.1 Reference Leri_hhj_1 Primary Assembly

    Range
    9024075..9062902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055647647.1 → XP_055503622.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X4

  2. XM_055647643.1 → XP_055503618.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

    Related
    ENSLERP00010049004.1, ENSLERT00010069620.1

  3. XM_055647644.1 → XP_055503619.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2

    Related
    ENSLERP00010048985.1, ENSLERT00010069601.1

  4. XM_055647648.1 → XP_055503623.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X5

    Related
    ENSLERP00010048940.1, ENSLERT00010069556.1

  5. XM_055647646.1 → XP_055503621.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X3

Nucleotide Protein
Heading Accession and Version

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