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sgcd sarcoglycan, delta (dystrophin-associated glycoprotein) [ Leucoraja erinaceus (little skate) ]

Gene ID: 129701849, updated on 12-Oct-2024

Summary

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Gene symbol
sgcd
Gene description
sarcoglycan, delta (dystrophin-associated glycoprotein)
See related
EnsemblRapid:ENSLERG00010026618
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See sgcd in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 11 NC_073387.1 (55455846..55658165)

Chromosome 11 - NC_073387.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129701848 Neighboring gene U2 spliceosomal RNA Neighboring gene rho GTPase-activating protein 7 Neighboring gene basic salivary proline-rich protein 2-like Neighboring gene arginyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073387.1 Chromosome 11 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073387.1 Reference Leri_hhj_1 Primary Assembly

    Range
    55455846..55658165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055643328.1 → XP_055499303.1  delta-sarcoglycan isoform X1

    Related
    ENSLERP00010051271.1, ENSLERT00010072345.1

  2. XM_055643330.1 → XP_055499305.1  delta-sarcoglycan isoform X2

  3. XM_055643332.1 → XP_055499307.1  delta-sarcoglycan isoform X2

  4. XM_055643329.1 → XP_055499304.1  delta-sarcoglycan isoform X2

    Related
    ENSLERP00010051265.1, ENSLERT00010072339.1
Nucleotide Protein
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Gene LinkOut

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