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extl2 exostosin-like glycosyltransferase 2 [ Leucoraja erinaceus (little skate) ]

Gene ID: 129701237, updated on 12-Oct-2024

Summary

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Gene symbol
extl2
Gene description
exostosin-like glycosyltransferase 2
See related
EnsemblRapid:ENSLERG00010020191
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See extl2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 10 NC_073386.1 (55095543..55114297)

Chromosome 10 - NC_073386.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 5 Neighboring gene solute carrier family 30 member 7 Neighboring gene vascular cell adhesion protein 1-like Neighboring gene vascular cell adhesion molecule 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073386.1 Chromosome 10 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073386.1 Reference Leri_hhj_1 Primary Assembly

    Range
    55095543..55114297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055642362.1 → XP_055498337.1  exostosin-like 2 isoform X3

    Related
    ENSLERP00010036001.1, ENSLERT00010053060.1

  2. XM_055642359.1 → XP_055498334.1  exostosin-like 2 isoform X2

  3. XM_055642358.1 → XP_055498333.1  exostosin-like 2 isoform X1

    Related
    ENSLERP00010035996.1, ENSLERT00010053050.1

  4. XM_055642360.1 → XP_055498335.1  exostosin-like 2 isoform X3

    Related
    ENSLERP00010035998.1, ENSLERT00010053055.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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