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ctsc cathepsin C [ Leucoraja erinaceus (little skate) ]

Gene ID: 129698245, updated on 12-Oct-2024

Summary

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Gene symbol
ctsc
Gene description
cathepsin C
See related
EnsemblRapid:ENSLERG00010020733
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See ctsc in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 6 NC_073382.1 (64876709..64910564, complement)

Chromosome 6 - NC_073382.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 135 Neighboring gene RAB38b, member of RAS oncogene family Neighboring gene uncharacterized LOC129698247 Neighboring gene glutamate receptor, metabotropic 5b Neighboring gene tyrosinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073382.1 Chromosome 6 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dipeptidyl peptidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073382.1 Reference Leri_hhj_1 Primary Assembly

    Range
    64876709..64910564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055637257.1 → XP_055493232.1  dipeptidyl peptidase 1 isoform X2

  2. XM_055637256.1 → XP_055493231.1  dipeptidyl peptidase 1 isoform X1

    Related
    ENSLERP00010037148.1, ENSLERT00010054591.1
Nucleotide Protein
Heading Accession and Version

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