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unm_hu7910 un-named hu7910 [ Leucoraja erinaceus (little skate) ]

Gene ID: 129696265, updated on 12-Oct-2024

Summary

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Gene symbol
unm_hu7910
Gene description
un-named hu7910
See related
EnsemblRapid:ENSLERG00010012035
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
zebrafish all
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Genomic context

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See unm_hu7910 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 4 NC_073380.1 (34308115..34515402)

Chromosome 4 - NC_073380.1Genomic Context describing neighboring genes Neighboring gene gamma-glutamyl hydrolase-like Neighboring gene sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3 Neighboring gene uncharacterized LOC129696264 Neighboring gene U6 spliceosomal RNA Neighboring gene clavesin-1-like Neighboring gene chromodomain helicase DNA binding protein 7 Neighboring gene RAB2A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073380.1 Chromosome 4 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073380.1 Reference Leri_hhj_1 Primary Assembly

    Range
    34308115..34515402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055633993.1 → XP_055489968.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

  2. XM_055633995.1 → XP_055489970.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

  3. XM_055633996.1 → XP_055489971.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

    Related
    ENSLERP00010019883.1, ENSLERT00010030170.1

  4. XM_055633994.1 → XP_055489969.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases