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galntl6 polypeptide N-acetylgalactosaminyltransferase like 6 [ Leucoraja erinaceus (little skate) ]

Gene ID: 129695408, updated on 12-Oct-2024

Summary

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Gene symbol
galntl6
Gene description
polypeptide N-acetylgalactosaminyltransferase like 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Leucoraja erinaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Batoidea; Rajiformes; Rajidae; Leucoraja
Orthologs
human zebrafish all
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Genomic context

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See galntl6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current Leri_hhj_1 (GCF_028641065.1) 3 NC_073379.1 (25575180..26374370, complement)

Chromosome 3 - NC_073379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129695407 Neighboring gene UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene U2 spliceosomal RNA Neighboring gene transfer RNA lysine (anticodon UUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073379.1 Chromosome 3 Reference Leri_hhj_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028641065.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Leri_hhj_1 Primary Assembly

Genomic

  1. NC_073379.1 Reference Leri_hhj_1 Primary Assembly

    Range
    25575180..26374370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055632320.1 → XP_055488295.1  polypeptide N-acetylgalactosaminyltransferase-like 6

  2. XM_055632321.1 → XP_055488296.1  polypeptide N-acetylgalactosaminyltransferase-like 6

Nucleotide Protein
Heading Accession and Version

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