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SGPP1 sphingosine-1-phosphate phosphatase 1 [ Moschus berezovskii (Chinese forest musk deer) ]

Gene ID: 129562822, updated on 26-Mar-2024

Summary

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Gene symbol
SGPP1
Gene description
sphingosine-1-phosphate phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Moschus berezovskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus
Orthologs
human mouse all
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Genomic context

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See SGPP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2237691v1 (GCF_022376915.1) Unplaced Scaffold NW_026573596.1 (27489312..27532471)

NW_026573596.1Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing nuclear envelope protein 2 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog Neighboring gene WD repeat domain 89 Neighboring gene protein phosphatase 2 regulatory subunit B'epsilon

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026573596 Unplaced Scaffold Reference ASM2237691v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022376915.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237691v1 Primary Assembly

Genomic

  1. NW_026573596.1 Reference ASM2237691v1 Primary Assembly

    Range
    27489312..27532471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055436285.1 → XP_055292260.1  sphingosine-1-phosphate phosphatase 1

Nucleotide Protein
Heading Accession and Version

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