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CAPN3 calpain 3 [ Moschus berezovskii (Chinese forest musk deer) ]

Gene ID: 129562575, updated on 26-Mar-2024

Summary

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Gene symbol
CAPN3
Gene description
calpain 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Moschus berezovskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus
Orthologs
human mouse all
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Genomic context

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See CAPN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2237691v1 (GCF_022376915.1) Unplaced Scaffold NW_026573596.1 (66641523..66692747, complement)

NW_026573596.1Genomic Context describing neighboring genes Neighboring gene synaptosome associated protein 23 Neighboring gene zinc finger protein 106 Neighboring gene glucosidase alpha, neutral C Neighboring gene transmembrane protein 87A Neighboring gene VPS39 subunit of HOPS complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026573596 Unplaced Scaffold Reference ASM2237691v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022376915.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237691v1 Primary Assembly

Genomic

  1. NW_026573596.1 Reference ASM2237691v1 Primary Assembly

    Range
    66641523..66692747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055435876.1 → XP_055291851.1  calpain-3 isoform X2

  2. XM_055435875.1 → XP_055291850.1  calpain-3 isoform X1

  3. XM_055435877.1 → XP_055291852.1  calpain-3 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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