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GNPDA2 glucosamine-6-phosphate deaminase 2 [ Moschus berezovskii (Chinese forest musk deer) ]

Gene ID: 129562199, updated on 26-Mar-2024

Summary

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Gene symbol
GNPDA2
Gene description
glucosamine-6-phosphate deaminase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Moschus berezovskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus
Orthologs
human mouse all
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Genomic context

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See GNPDA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2237691v1 (GCF_022376915.1) Unplaced Scaffold NW_026573585.1 (49462345..49491776)

NW_026573585.1Genomic Context describing neighboring genes Neighboring gene craniofacial development protein 2-like Neighboring gene 60S ribosomal protein L21-like Neighboring gene uncharacterized LOC129562200 Neighboring gene GTP binding elongation factor GUF1 Neighboring gene Yip1 domain family member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026573585 Unplaced Scaffold Reference ASM2237691v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022376915.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237691v1 Primary Assembly

Genomic

  1. NW_026573585.1 Reference ASM2237691v1 Primary Assembly

    Range
    49462345..49491776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055435267.1 → XP_055291242.1  glucosamine-6-phosphate isomerase 2 isoform X1

  2. XM_055435268.1 → XP_055291243.1  glucosamine-6-phosphate isomerase 2 isoform X2

  3. XM_055435269.1 → XP_055291244.1  glucosamine-6-phosphate isomerase 2 isoform X3

Nucleotide Protein
Heading Accession and Version

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