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USP42 ubiquitin specific peptidase 42 [ Moschus berezovskii (Chinese forest musk deer) ]

Gene ID: 129545750, updated on 26-Mar-2024

Summary

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Gene symbol
USP42
Gene description
ubiquitin specific peptidase 42
Gene type
protein coding
RefSeq status
MODEL
Organism
Moschus berezovskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus
Orthologs
human mouse all
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Genomic context

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See USP42 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2237691v1 (GCF_022376915.1) Unplaced Scaffold NW_026572150.1 (37679684..37723577)

NW_026572150.1Genomic Context describing neighboring genes Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 2 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 1 Neighboring gene ankyrin repeat domain 61 Neighboring gene cytohesin 3 Neighboring gene protein FRG1-like Neighboring gene ubiquitin-conjugating enzyme E2 T-like Neighboring gene family with sequence similarity 220 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026572150 Unplaced Scaffold Reference ASM2237691v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022376915.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237691v1 Primary Assembly

Genomic

  1. NW_026572150.1 Reference ASM2237691v1 Primary Assembly

    Range
    37679684..37723577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055410338.1 → XP_055266313.1  ubiquitin carboxyl-terminal hydrolase 42 isoform X2

  2. XM_055410337.1 → XP_055266312.1  ubiquitin carboxyl-terminal hydrolase 42 isoform X1

Nucleotide Protein
Heading Accession and Version

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