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B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Moschus berezovskii (Chinese forest musk deer) ]

Gene ID: 129536857, updated on 26-Mar-2024

Summary

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Gene symbol
B4GALNT1
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Moschus berezovskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus
Orthologs
human mouse all
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Genomic context

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See B4GALNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM2237691v1 (GCF_022376915.1) Unplaced Scaffold NW_026573707.1 (57576619..57583568)

NW_026573707.1Genomic Context describing neighboring genes Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene solute carrier family 26 member 10-like Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene deltex E3 ubiquitin ligase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026573707 Unplaced Scaffold Reference ASM2237691v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022376915.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237691v1 Primary Assembly

Genomic

  1. NW_026573707.1 Reference ASM2237691v1 Primary Assembly

    Range
    57576619..57583568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055396013.1 → XP_055251988.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1

  2. XM_055396014.1 → XP_055251989.1  beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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