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PER2 period circadian regulator 2 [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129523451, updated on 26-Mar-2024

Summary

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Gene symbol
PER2
Gene description
period circadian regulator 2
Locus tag
NYPRO_LOCUS19517
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See PER2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575133.1 (36354789..36395630)

NW_026575133.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 1 Neighboring gene TRAF3 interacting protein 1 Neighboring gene uncharacterized LOC129493615 Neighboring gene hes family bHLH transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575133 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
period circadian protein homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575133.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    36354789..36395630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055346409.1 → XP_055202384.1  period circadian protein homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A811ZDK0

  2. XM_055346408.1 → XP_055202383.1  period circadian protein homolog 2 isoform X1

  3. XM_055346410.1 → XP_055202385.1  period circadian protein homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A811ZDK0

  4. XM_055346411.1 → XP_055202386.1  period circadian protein homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A811ZDK0

RNA

  1. XR_008667114.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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