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PDCD4 programmed cell death 4 [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129523445, updated on 26-Mar-2024

Summary

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Gene symbol
PDCD4
Gene description
programmed cell death 4
Locus tag
NYPRO_LOCUS19268
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See PDCD4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575133.1 (14646301..14675425)

NW_026575133.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes 3 Neighboring gene RNA binding motif protein 20 Neighboring gene U4 spliceosomal RNA Neighboring gene BBSome interacting protein 1 Neighboring gene SHOC2 leucine rich repeat scaffold protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575133 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
programmed cell death protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575133.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    14646301..14675425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055346385.1 → XP_055202360.1  programmed cell death protein 4

    UniProtKB/TrEMBL
    A0A811ZCM4

  2. XM_055346388.1 → XP_055202363.1  programmed cell death protein 4

    UniProtKB/TrEMBL
    A0A811ZCM4

  3. XM_055346386.1 → XP_055202361.1  programmed cell death protein 4

    UniProtKB/TrEMBL
    A0A811ZCM4

  4. XM_055346387.1 → XP_055202362.1  programmed cell death protein 4

    UniProtKB/TrEMBL
    A0A811ZCM4
Nucleotide Protein
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