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RPE ribulose-5-phosphate-3-epimerase [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129522979, updated on 26-Mar-2024

Summary

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Gene symbol
RPE
Gene description
ribulose-5-phosphate-3-epimerase
Locus tag
NYPRO_LOCUS18888
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See RPE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575132.1 (17939507..17955359)

NW_026575132.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein 2 Neighboring gene putative protein PTGES3L Neighboring gene unc-80 homolog, NALCN channel complex subunit Neighboring gene zinc finger protein 789-like Neighboring gene KAT8 regulatory NSL complex subunit 1 like Neighboring gene 60S ribosomal protein L26-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575132 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-ribulose-phosphate 3-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribulose-phosphate 3-epimerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575132.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    17939507..17955359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055345560.1 → XP_055201535.1  ribulose-phosphate 3-epimerase

    UniProtKB/TrEMBL
    A0A811ZBK2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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