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IDH1 isocitrate dehydrogenase (NADP(+)) 1 [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129522831, updated on 26-Mar-2024

Summary

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Gene symbol
IDH1
Gene description
isocitrate dehydrogenase (NADP(+)) 1
Locus tag
NYPRO_LOCUS18879
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See IDH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575132.1 (16584246..16603354, complement)

NW_026575132.1Genomic Context describing neighboring genes Neighboring gene gamma-crystallin A Neighboring gene chromosome unknown C2orf80 homolog Neighboring gene phosphoinositide kinase, FYVE-type zinc finger containing Neighboring gene parathyroid hormone 2 receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575132 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575132.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    16584246..16603354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055345292.1 → XP_055201267.1  isocitrate dehydrogenase [NADP] cytoplasmic

    UniProtKB/TrEMBL
    A0A811ZBI6

  2. XM_055345293.1 → XP_055201268.1  isocitrate dehydrogenase [NADP] cytoplasmic

    UniProtKB/TrEMBL
    A0A811ZBI6
Nucleotide Protein
Heading Accession and Version

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