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XYLB xylulokinase [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129507076, updated on 11-Apr-2024

Summary

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Gene symbol
XYLB
Gene description
xylulokinase
Locus tag
NYPRO_LOCUS6083
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See XYLB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575042.1 (8477797..8530682)

NW_026575042.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 13 Neighboring gene solute carrier family 22 member 14 Neighboring gene activin A receptor type 2B Neighboring gene anosmin-1-like Neighboring gene exo/endonuclease G

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575042 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575042.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    8477797..8530682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055321270.1 → XP_055177245.1  xylulose kinase isoform X2

  2. XM_055321269.1 → XP_055177244.1  xylulose kinase isoform X1

    UniProtKB/TrEMBL
    A0A811Y8K3

  3. XM_055321271.1 → XP_055177246.1  xylulose kinase isoform X3

Nucleotide Protein
Heading Accession and Version

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