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INPP5E inositol polyphosphate-5-phosphatase E [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129507017, updated on 26-Mar-2024

Summary

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Gene symbol
INPP5E
Gene description
inositol polyphosphate-5-phosphatase E
Locus tag
NYPRO_LOCUS1083
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See INPP5E in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575020.1 (31056714..31066448)

NW_026575020.1Genomic Context describing neighboring genes Neighboring gene notch receptor 1 Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene endosome associated trafficking regulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575020 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol polyphosphate 5-phosphatase type IV

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575020.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    31056714..31066448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055321149.1 → XP_055177124.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1

  2. XM_055321140.1 → XP_055177115.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1

  3. XM_055321157.1 → XP_055177132.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X2

    UniProtKB/TrEMBL
    A0A811XSJ0

  4. XM_055321166.1 → XP_055177141.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X3

Nucleotide Protein
Heading Accession and Version

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