U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PLCD1 phospholipase C delta 1 [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129506931, updated on 26-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PLCD1
Gene description
phospholipase C delta 1
Locus tag
NYPRO_LOCUS6074
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PLCD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575042.1 (8131959..8163176, complement)

NW_026575042.1Genomic Context describing neighboring genes Neighboring gene CTD small phosphatase like Neighboring gene villin like Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene acetyl-CoA acyltransferase 1 Neighboring gene MYD88 innate immune signal transduction adaptor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_026575042 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575042.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    8131959..8163176 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055320975.1 → XP_055176950.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1

  2. XM_055320979.1 → XP_055176954.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X4

  3. XM_055320978.1 → XP_055176953.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X3

  4. XM_055320977.1 → XP_055176952.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X2

    UniProtKB/TrEMBL
    A0A811Y9H7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.