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GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129494233, updated on 26-Mar-2024

Summary

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Gene symbol
GDPD1
Gene description
glycerophosphodiester phosphodiesterase domain containing 1
Locus tag
NYPRO_LOCUS752
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See GDPD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575020.1 (15711984..15765612)

NW_026575020.1Genomic Context describing neighboring genes Neighboring gene oligosaccharyltransferase complex subunit OSTC-like Neighboring gene proline rich 11 Neighboring gene spindle and kinetochore associated complex subunit 2 Neighboring gene SMG8 nonsense mediated mRNA decay factor Neighboring gene yippee like 2 Neighboring gene DEAH-box helicase 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575020 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acylethanolamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophospholipase D GDPD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575020.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    15711984..15765612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055301150.1 → XP_055157125.1  lysophospholipase D GDPD1 isoform X2

  2. XM_055301080.1 → XP_055157055.1  lysophospholipase D GDPD1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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