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LOC129456110 solute carrier family 45 member 4 [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129456110, updated on 10-Apr-2024

Summary

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Gene symbol
LOC129456110
Gene description
solute carrier family 45 member 4
See related
EnsemblRapid:ENSIRMG00000000323
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
Orthologs
zebrafish all
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Genomic context

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See LOC129456110 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 12 NC_073348.1 (40343867..40391453)

Chromosome 12 - NC_073348.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel, subfamily N, member 1 Neighboring gene G-protein coupled receptor 20 Neighboring gene leucine rich repeat containing 3B Neighboring gene kelch-like family member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073348.1 Chromosome 12 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 45 member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073348.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    40343867..40391453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055220946.1 → XP_055076921.1  solute carrier family 45 member 4

    Related
    ENSIRMP00000000397.1, ENSIRMT00000000684.1

  2. XM_055220947.1 → XP_055076922.1  solute carrier family 45 member 4

    Related
    ENSIRMP00000000390.1, ENSIRMT00000000673.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases