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ext1b exostosin glycosyltransferase 1b [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129454424, updated on 10-Apr-2024

Summary

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Gene symbol
ext1b
Gene description
exostosin glycosyltransferase 1b
See related
EnsemblRapid:ENSIRMG00000031188
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
Orthologs
zebrafish all
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Genomic context

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See ext1b in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 12 NC_073348.1 (25370790..25479405, complement)

Chromosome 12 - NC_073348.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 30 member 8 Neighboring gene uncharacterized LOC129455684 Neighboring gene mediator complex subunit 30 Neighboring gene uncharacterized LOC129454425 Neighboring gene sterile alpha motif domain containing 12 Neighboring gene actin binding Rho activating protein b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073348.1 Chromosome 12 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073348.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    25370790..25479405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055218944.1 → XP_055074919.1  exostosin-1b

  2. XM_055218945.1 → XP_055074920.1  exostosin-1b

    Related
    ENSIRMP00000050360.1, ENSIRMT00000072043.1

  3. XM_055218943.1 → XP_055074918.1  exostosin-1b

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases