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LOC129452420 beta-1,3-galactosyltransferase 2 [ Misgurnus anguillicaudatus (oriental weatherfish) ]

Gene ID: 129452420, updated on 26-Mar-2024

Summary

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Gene symbol
LOC129452420
Gene description
beta-1,3-galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Misgurnus anguillicaudatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Misgurnus
Orthologs
zebrafish all
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Genomic context

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See LOC129452420 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_04 current HAU_Mang_1.0 (GCF_027580225.1) 1 NC_073337.1 (59209146..59213864, complement)

Chromosome 1 - NC_073337.1Genomic Context describing neighboring genes Neighboring gene kiaa0895l Neighboring gene NAD(P)H dehydrogenase, quinone 1 Neighboring gene potassium voltage-gated channel, subfamily G, member 4b Neighboring gene dipeptidase 1 Neighboring gene sulfotransferase family 5A, member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_073337.1 Chromosome 1 Reference HAU_Mang_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027580225.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HAU_Mang_1.0 Primary Assembly

Genomic

  1. NC_073337.1 Reference HAU_Mang_1.0 Primary Assembly

    Range
    59209146..59213864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055216266.1 → XP_055072241.1  beta-1,3-galactosyltransferase 2-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases